He was sent in the Wasteland to battle the animatronic Captain Hook, but after the Blot's attack, Captain Hook went mad and stole the Sprite (the Wasteland's version of Tinker Bell) leaving Pete Pan unable to fly and trapped on Skull Island (Skull Rock). When Mickey rescues the Sprite, it flies to Skull Island and Pete Pan comes to the Jolly Roger to fight Hook, if you didn't defeat him already, that is. This keeps Hook busy to his original antics. If you talk to Pete in Mean Street, he will give you a Power Spark.
Unlike his other counterparts, Pete Pan is more friendly, active, honest and loyal. In fact, he shares many mannerisms with Peter Pan, including crowing like a rooster.
In the sequel, Pete Pan has been corrupted and is hired by the Mad Doctor to be the security guard at the construction Site in Ventureland, refusing to let Mickey and Oswald enter. At the end of the game, he appears with Big Bad Pete and Small Pete jumping into the Ventureland projector to possibly plan an evil scheme on Wasteland.
- Even if you've defeated Captain Hook, you can still rescue the sprite and restore Pete Pan's flying ability, although this won't change the ending scene with Hook's hook sinking. It is unknown what he does after this, but is presumed that Pete Pan won't have anything to do, and most certainly if you jammed/or ignored the Pirate Conversion Machine.